# Bioresearch Introduction

> Describe the BioResearch Agent Framework and its capabilities to a user or agent. Use when the user asks "what can BioResearch Agent do", wants an overview of available workflows, or is deciding which skill to invoke for a biomedical research task.

- **Type:** Skill
- **Install:** `agentstack add skill-alim430-bioresearch-agent-project-introduction`
- **Verified:** Yes — security-reviewed for prompt injection and unsafe behavior
- **Seller:** [Alim430](https://agentstack.voostack.com/s/alim430)
- **Installs:** 0
- **Category:** [Agent Skills](https://agentstack.voostack.com/c/agent-skills)
- **Latest version:** 0.1.0
- **License:** MIT
- **Upstream author:** [Alim430](https://github.com/Alim430)
- **Source:** https://github.com/Alim430/bioresearch-agent/tree/main/skills/core/project-introduction

## Install

```sh
agentstack add skill-alim430-bioresearch-agent-project-introduction
```

Requires the [AgentStack CLI](https://agentstack.voostack.com/docs/cli). Works with Claude Code, Cursor, and any MCP-compatible agent.

## About

# BioResearch Agent — Framework Introduction

## What this skill is

A reference skill that explains the BioResearch Agent Framework's capabilities. It adds **no
analysis of its own** — it only describes what the framework can do and points to the right
workflow skill.

## Capabilities at a glance

| Capability | Workflow | Entry point |
|:---|:---|:---|
| Literature review + knowledge graph | `literature` | `bioresearch run literature --query "..."` |
| Biomarker discovery (DEG + enrichment) | `biomarker` | `bioresearch run biomarker --disease "..."` |
| Differential expression (DEG) | `biomarker` | `bioresearch run biomarker --disease "..."` |
| Pathway / GO / KEGG enrichment | `biomarker` | `bioresearch run biomarker --disease "..."` |
| Mendelian randomization (MR) | `causal` | `bioresearch run causal --exposure X --outcome Y` |
| Environment / reproducibility check | `doctor` | `bioresearch doctor` |

## Run

No computation. This skill informs; the actual work is done by the workflow skills
(`bioresearch-literature-analysis`, `bioresearch-biomarker-discovery`,
`bioresearch-differential-expression`, `bioresearch-pathway-enrichment`,
`bioresearch-causal-inference`, `bioresearch-environment-check`).

## Honesty note

BioResearch Agent executes **reproducible workflows** (t-test + Bonferroni, hypergeometric
enrichment, IVW-MR) by dispatching to existing domain libraries. It does not reason about
biology and does not discover novel science on its own.

## Source & license

This open-source skill is cataloged on AgentStack and links to its original source — we do not rehost the code.

- **Author:** [Alim430](https://github.com/Alim430)
- **Source:** [Alim430/bioresearch-agent](https://github.com/Alim430/bioresearch-agent)
- **License:** MIT

Install and usage instructions live in the source repository linked above.

## Pricing

- **Free** — Free

## Security capabilities

Automated source analysis of v0.1.0 — what this tool can access:

- **Network access:** no
- **Filesystem access:** no
- **Shell / process execution:** no
- **Environment & secrets:** no
- **Dynamic code execution:** no

*"Yes" means the capability is present in the source — more access means more to trust, not that it is unsafe.*


## Versions

- **0.1.0** — security scan: passed — Imported from the upstream source.

## Links

- Listing page: https://agentstack.voostack.com/l/skill-alim430-bioresearch-agent-project-introduction
- Seller: https://agentstack.voostack.com/s/alim430
- Browse the marketplace: https://agentstack.voostack.com/browse

---
Listed on AgentStack — the marketplace for AI agent skills and MCP servers. Every listing is security-reviewed. Creators keep 70%.