# Bio Analysis Tools

> 生物信息分析工具箱范畴路由。用于 Biopython/pysam/Scanpy/scvi-tools/R/Bioconductor/RDKit/质谱工具/统计可视化等工具型请求，选择具体工具 skill，明确输入格式、API 边界和下游交接。

- **Type:** Skill
- **Install:** `agentstack add skill-onescience-ai-oneskills-analysis-tools`
- **Verified:** Yes — security-reviewed for prompt injection and unsafe behavior
- **Seller:** [onescience-ai](https://agentstack.voostack.com/s/onescience-ai)
- **Installs:** 0
- **Category:** [Agent Skills](https://agentstack.voostack.com/c/agent-skills)
- **Latest version:** 0.1.0
- **License:** MIT
- **Upstream author:** [onescience-ai](https://github.com/onescience-ai)
- **Source:** https://github.com/onescience-ai/OneSkills/tree/master/skills/onescience-role/assets/bio_domain/analysis-tools

## Install

```sh
agentstack add skill-onescience-ai-oneskills-analysis-tools
```

Requires the [AgentStack CLI](https://agentstack.voostack.com/docs/cli). Works with Claude Code, Cursor, and any MCP-compatible agent.

## About

# 生信分析工具箱范畴路由

当用户主要在问“用什么工具、怎么解析、怎么写某个库的分析逻辑”时，使用本范畴。若任务是端到端分析链，先回到 `../workflows/SKILL.md`。

## 具体 skill 路由

- Python 生信基础库、序列/结构/NCBI、BAM/VCF 编程：读取 `./python-bio-toolkit/SKILL.md`
- R/Bioconductor、DESeq2、edgeR、Seurat、GenomicRanges：读取 `./r-bioconductor-toolkit/SKILL.md`
- Scanpy、AnnData、scvi-tools、cell type annotation：读取 `./single-cell-toolkit/SKILL.md`
- RDKit、SMILES/SDF、fingerprint、descriptor、similarity：读取 `./cheminformatics-toolkit/SKILL.md`
- PyOpenMS、matchms、mzML、feature detection、spectral matching：读取 `./mass-spectrometry-toolkit/SKILL.md`
- 统计建模、可视化、报告图：读取 `./statistics-visualization/SKILL.md`

## 交接规则

输出时至少整理：

- `tool_family`
- `input_format`
- `operation`
- `data_size`
- `expected_output`
- `version_or_api_risk`
- `execution_entry`

## Source & license

This open-source skill is cataloged on AgentStack and links to its original source — we do not rehost the code.

- **Author:** [onescience-ai](https://github.com/onescience-ai)
- **Source:** [onescience-ai/OneSkills](https://github.com/onescience-ai/OneSkills)
- **License:** MIT

Install and usage instructions live in the source repository linked above.

## Pricing

- **Free** — Free

## Security capabilities

Automated source analysis of v0.1.0 — what this tool can access:

- **Network access:** no
- **Filesystem access:** no
- **Shell / process execution:** no
- **Environment & secrets:** no
- **Dynamic code execution:** no

*"Yes" means the capability is present in the source — more access means more to trust, not that it is unsafe.*


## Versions

- **0.1.0** — security scan: passed — Imported from the upstream source.

## Links

- Listing page: https://agentstack.voostack.com/l/skill-onescience-ai-oneskills-analysis-tools
- Seller: https://agentstack.voostack.com/s/onescience-ai
- Browse the marketplace: https://agentstack.voostack.com/browse

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Listed on AgentStack — the marketplace for AI agent skills and MCP servers. Every listing is security-reviewed. Creators keep 70%.