# awslabs > Open-source publisher. Listings imported from github.com/awslabs — credited to the original author with their license. - **Listings:** 81 - **Total installs:** 0 - **Profile:** https://agentstack.voostack.com/s/awslabs - **Website:** https://github.com/awslabs ## Published listings - [Amplify Workflow](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-amplify-workflow) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-amplify-workflow` Build and deploy full-stack web and mobile apps with AWS Amplify Gen2 - [Aws Step Functions](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-step-functions) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-aws-step-functions` Build workflows with AWS Step Functions state machines using the JSONata query language. Covers Amazon States Language (ASL) structure, state types, variables, data transformation, error handling, AWS service integration, and migrating from the JSONPath to the JSONata query language. - [Finetuning Technique](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-finetuning-technique) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-finetuning-technique` Selects a fine-tuning technique (SFT, DPO, RLVR, or RLAIF) for the user's use case and validates it against the selected model's available recipes. Use when the user has decided to finetune and needs to choose a technique, or when the technique needs to be validated against a model. Requires a base model to already be selected (via model-selection skill). - [Model Deployment](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-model-deployment) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-model-deployment` Generates code that deploys fine-tuned models from SageMaker Serverless Model Customization to SageMaker endpoints or Bedrock. Use when the user says "deploy my model", "create an endpoint", "make it available", or asks about deployment options. Identifies the correct deployment pathway (Nova vs OSS), generates deployment code, and handles endpoint configuration. - [Aws Lambda Managed Instances](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-lambda-managed-instances) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-aws-lambda-managed-instances` > - [Model Evaluation](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-model-evaluation) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-model-evaluation` Generates python code that evaluates SageMaker models. Supports two evaluation types: LLM-as-Judge and Custom Scorer. Use when the user says "evaluate my model", "run a benchmark", "test model performance", "how did my model perform", "compare models", or other similar requests. - [Lza Mcp Server](https://agentstack.voostack.com/l/mcp-awslabs-lza-mcp-server) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-lza-mcp-server` MCP server from awslabs/lza-mcp-server. - [Aws Transform](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-transform) — Skill · Free — `agentstack add skill-awslabs-agent-plugins-aws-transform` Migrate, modernize, and upgrade codebases to AWS. Run analysis on repos for tech debt, security vulnerabilities, and modernization opportunities. Transforms .NET Framework to .NET 8/10, mainframe COBOL to Java, VMware VMs to EC2, SQL Server to Aurora, and upgrades Java/Python/Node.js versions and AWS SDKs. Use when the user says "migrate .NET to AWS", "upgrade Java to 17/21", "modernize COBOL", "… - [Run Model Context Protocol Servers With Aws Lambda](https://agentstack.voostack.com/l/mcp-awslabs-run-model-context-protocol-servers-with-aws-lambda) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-run-model-context-protocol-servers-with-aws-lambda` Run existing Model Context Protocol (MCP) stdio-based servers in AWS Lambda functions - [Mcp Server For Oscal](https://agentstack.voostack.com/l/mcp-awslabs-mcp-server-for-oscal) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-mcp-server-for-oscal` OSCAL tools for AI agents - [Elastic Beanstalk](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-elastic-beanstalk) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-elastic-beanstalk` Deploy to AWS Elastic Beanstalk. Triggers on: elastic beanstalk, EB, managed EC2 platform, web app with managed patching, worker on EC2, Heroku alternative, don't want to manage servers or container orchestration, migrate from Heroku, managed operational lifecycle. Covers Elastic Beanstalk on EC2 for web and worker applications. - [Threat Modeling Mcp Server](https://agentstack.voostack.com/l/mcp-awslabs-threat-modeling-mcp-server) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-threat-modeling-mcp-server` MCP server from awslabs/threat-modeling-mcp-server. - [Nx Plugin For Aws](https://agentstack.voostack.com/l/mcp-awslabs-nx-plugin-for-aws) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-nx-plugin-for-aws` The @aws/nx-plugin is a collection of code generators that automate the creation and configuration of cloud-native applications using AWS, TypeScript, Python and React within the Nx development ecosystem. - [Log Analyzer With MCP](https://agentstack.voostack.com/l/mcp-awslabs-log-analyzer-with-mcp) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-log-analyzer-with-mcp` A Model Context Protocol (MCP) server that provides AI assistants access to AWS CloudWatch Logs for analysis, searching, and correlation - [Dsql](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-dsql) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-dsql` Build with Aurora DSQL — manage schemas, execute queries, handle migrations, diagnose query plans, load data, and develop applications with a serverless, distributed SQL database. Covers IAM auth, multi-tenant patterns, MySQL-to-DSQL and PostgreSQL-to-DSQL schema conversion, FK replacement code generation, OCC retry patterns, ORM migration (Django/Hibernate/Rails), DDL operations, query plan expl… - [Deploy](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-deploy) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-deploy` Deploy applications to AWS. Triggers on phrases like: deploy to AWS, host on AWS, run this on AWS, AWS architecture, estimate AWS cost, generate infrastructure. Analyzes any codebase and deploys to optimal AWS services. - [Use Case Specification](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-use-case-specification) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-use-case-specification` Creates a reusable use case specification file that defines the business problem, stakeholders, and measurable success criteria for model customization, as recommended by the AWS Responsible AI Lens. Use as the default first step in any model customization plan. Skip only if the user explicitly declines or already has a use case specification to reuse. Captures problem statement, primary users, a… - [Planning](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-planning) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-planning` Discovers user intent and generates a structured, step-by-step plan for model customization workflows. This skill must always be activated alongside any other skill when the user's request relates to model customization — including fine-tuning, training, building, customizing, reviewing data, or getting advice on approach, regardless of domain. Do not skip this skill even if the immediate ask is… - [Graphrag Toolkit](https://agentstack.voostack.com/l/mcp-awslabs-graphrag-toolkit) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-graphrag-toolkit` Python toolkit for building graph-enhanced GenAI applications - [Awslabs Mcp](https://agentstack.voostack.com/l/mcp-awslabs-mcp) — MCP server · Free · security-reviewed — `agentstack add mcp-awslabs-mcp` Open source MCP Servers for AWS - [Aws Lambda](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-lambda) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-aws-lambda` Design, build, deploy, test, and debug serverless applications with AWS Lambda. Triggers on phrases like: Lambda function, event source, serverless application, API Gateway, EventBridge, Step Functions, serverless API, event-driven architecture, Lambda trigger. For deploying non-serverless apps to AWS, use deploy-on-aws plugin instead. - [Hyperpod Ssm](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-ssm) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-ssm` Remote command execution and file transfer on SageMaker HyperPod cluster nodes via AWS Systems Manager (SSM). This is the primary interface for accessing HyperPod nodes — direct SSH is not available. Use when any skill, workflow, or user request needs to execute commands on cluster nodes, upload files to nodes, read/download files from nodes, run diagnostics, install packages, or perform any oper… - [Dataset Evaluation](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-dataset-evaluation) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-dataset-evaluation` Validates dataset formatting and quality for SageMaker model fine-tuning (SFT, DPO, or RLVR). Use when the user says "is my dataset okay", "evaluate my data", "check my training data", "I have my own data", or before starting any fine-tuning job. Detects file format, checks schema compliance against the selected model and technique, and reports whether the data is ready for training or evaluation. - [Finetuning](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-finetuning) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-finetuning` Generates code that fine-tunes a base model using SageMaker serverless training jobs. Use when the user says "start training", "fine-tune my model", "I'm ready to train", or when the plan reaches the finetuning step. Supports SFT, DPO, RLVR, and RLAIF trainers, including RLVR Lambda reward function and RLAIF custom prompt creation. - [Aws Genai Ml Architect](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-aws-genai-ml-architect) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-aws-genai-ml-architect` Reasoning skill for designing AWS GenAI and ML architectures for healthcare and life sciences workloads. Use when the user asks to choose between SageMaker and Bedrock, design a RAG system over medical literature, architect clinical NLP or medical imaging inference, plan genomics or drug discovery pipelines on AWS, address HIPAA/PHI compliance in ML systems, design MLOps for regulated clinical mo… - [Hyperpod Node Debugger](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-node-debugger) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-node-debugger` Diagnose and remediate per-node issues on a HyperPod cluster (EKS or Slurm) — a specific node is unhealthy, unresponsive, stuck, or needs replacing. Covers on-node EFA, GPU / accelerator hardware (XID, ECC, NVLink, row-remap, DCGM), Slurm node down/drained, disk and memory pressure, per-node lifecycle-script failures, SSM agent, container runtime, kernel panics, pod networking. Read-only. Not for… - [Hyperpod Slurm Debugger](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-slurm-debugger) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-slurm-debugger` Diagnostic-only skill for Slurm scheduler and node-daemon issues on Amazon SageMaker HyperPod Slurm clusters. Scope mirrors the HyperPod troubleshooting guide. Invoke when the user reports a Slurm node stuck in down/drain, "Node unexpectedly rebooted" after auto-repair, slurmd not running, jobs stuck PENDING with REASON=Resources while sinfo shows idle nodes, jobs stuck COMPLETING after node repl… - [Hyperpod Version Checker](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-version-checker) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-version-checker` Check and compare software component versions on SageMaker HyperPod cluster nodes - NVIDIA drivers, CUDA toolkit, cuDNN, NCCL, EFA, AWS OFI NCCL, GDRCopy, MPI, Neuron SDK (Trainium/Inferentia), Python, and PyTorch. Use when checking component versions, verifying CUDA/driver compatibility, detecting version mismatches across nodes, planning upgrades, documenting cluster configuration, or troublesh… - [Quantitative Proteomics](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-quantitative-proteomics) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-quantitative-proteomics` > - [Pharmacoepidemiology](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-pharmacoepidemiology) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-pharmacoepidemiology` Reason about pharmacoepidemiologic study design for causal inference from real-world data — choosing active comparator new-user designs, emulating target trials, avoiding immortal time bias, handling time-varying confounding with marginal structural models, and selecting propensity score methods. Use when the user asks to design a drug safety or effectiveness study, choose between propensity scor… - [Claims Analytics](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-claims-analytics) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-claims-analytics` > - [Translational Research](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-translational-research) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-translational-research` Reason about translational research problems in HCLS — especially neurology and hypothesis validation. Use when the user asks to design a validation study, evaluate a target, qualify a biomarker, choose endpoints, critique a preclinical-to-clinical plan, pick a trial design (basket/umbrella/platform), plan multimodal data integration, or assess whether a hypothesis is ready to advance. Triggers i… - [Multi Omics Pipeline](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-multi-omics-pipeline) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-multi-omics-pipeline` > - [Ngs Quality Control](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-ngs-quality-control) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-ngs-quality-control` NGS quality control pipeline for short-read sequencing data. Triggers on FastQC, QC, quality control, adapter trimming, coverage, mosdepth, Picard metrics, fastp, MultiQC, sequencing QC, BAM QC, WGS/WES coverage analysis. - [Molecular Docking](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-molecular-docking) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-molecular-docking` Molecular docking pipeline using AutoDock Vina for structure-based drug discovery. Triggers on docking, AutoDock Vina, receptor preparation, ligand preparation, PDBQT, grid box, virtual screening, binding affinity, pose prediction, structure-based virtual screening, "redocking RMSD", "Vina score", "docking pose", "prepare receptor", "ligand library screening". - [Pa Clinical Policy](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-pa-clinical-policy) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-pa-clinical-policy` > - [Variant Calling](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-variant-calling) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-variant-calling` Germline and somatic short-variant calling pipeline for Illumina short-read data. Use when the user mentions BWA, BWA-MEM2, GATK, HaplotypeCaller, Mutect2, VCF, GVCF, VQSR, variant calling, germline, somatic, SNV, or indel calling from FASTQ/BAM. - [Ehr Data Parsing](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-ehr-data-parsing) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-ehr-data-parsing` Parse and extract clinical data from HL7v2 messages and FHIR R4 resources using Python. Use when the user mentions HL7v2, HL7, FHIR, PID segment, OBX segment, MSH segment, Patient resource, Observation resource, Condition resource, MedicationRequest, EHR data extraction, clinical message parsing, FHIR bundle, HL7 to FHIR conversion, ADT message, ORU message, lab result extraction, or clinical dat… - [Risk Adjustment](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-risk-adjustment) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-risk-adjustment` > - [Ml Researcher](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-ml-researcher) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-ml-researcher` Reason about ML experiment design for healthcare and life sciences data. Use when the user asks to design an ML study, choose a model for clinical/biomedical data, set up cross-validation, pick evaluation metrics, audit fairness, plan a regulatory submission, or critique an ML pipeline on EHR, medical imaging, genomics, molecules, or clinical text. Triggers include "design an ML experiment", "whi… - [Claims Billing Rules](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-claims-billing-rules) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-claims-billing-rules` > - [Rna Seq Analysis](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-rna-seq-analysis) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-rna-seq-analysis` Bulk RNA-seq analysis pipeline covering alignment (STAR), quantification (Salmon, featureCounts), and differential expression (DESeq2). Triggers on RNA-seq, STAR, Salmon, DESeq2, differential expression, gene expression, tximport, featureCounts, transcriptomics, "bulk RNA-seq", "STAR alignment", "Salmon quantification", "gene counts", "DESeq2 results", "shrinkage estimator", "volcano plot RNA-seq… - [Pa Decision Automation](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-pa-decision-automation) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-pa-decision-automation` > - [Drug Repurposing](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-drug-repurposing) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-drug-repurposing` Reason about drug repurposing strategies in HCLS — choosing between target-based and phenotype-based approaches, evaluating mechanism-of-action overlap, querying drug-gene interaction databases, assessing clinical translatability, and ranking candidates by evidence strength. Use when the user asks to repurpose a drug, find approved drugs for a new indication, evaluate a repurposing candidate, que… - [Aws Architecture Diagram](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-architecture-diagram) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-aws-architecture-diagram` Generate validated AWS architecture diagrams as draw.io XML using official AWS4 icon libraries. Use this skill whenever the user wants to create, generate, or design AWS architecture diagrams, cloud infrastructure diagrams, or system design visuals. Also triggers for requests to visualize existing infrastructure from CloudFormation, CDK, or Terraform code. Supports two modes: analyze an existing… - [Hyperpod Performance Debugger](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-performance-debugger) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-performance-debugger` Diagnose performance issues on Amazon SageMaker HyperPod clusters — uneven NCCL bandwidth across nodes and poor filesystem throughput. Read-only. Surfaces host-side signals (Xid, ECC, NVLink, EFA reachability, FSx saturation) and routes to the appropriate sibling skill (hyperpod-node-debugger, hyperpod-nccl, hyperpod-version-checker, hyperpod-issue-report) for any remediation. Triggers on uneven… - [Digital Pathology](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-digital-pathology) — Skill · Free — `agentstack add skill-awslabs-hcls-agent-skills-digital-pathology` Generate correct code for whole-slide image (WSI) analysis using TIAToolbox and foundation models (H-optimus-0, UNI, Prov-GigaPath). Triggers on requests involving whole-slide images, WSI, digital pathology, histopathology, SVS/NDPI/pyramidal TIFF, tissue segmentation, patch extraction, stain normalization, H-optimus-0, TIAToolbox, CAMELYON16/17, SlideGraph, MIL aggregation, HoVer-Net, PanNuke, o… - [Cell Type Annotation](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-cell-type-annotation) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-cell-type-annotation` Generate code to assign cell type labels to single-cell RNA-seq clusters using CellTypist, SingleR, marker-based annotation, or reference label transfer (scANVI/ingest). Triggers on requests to "annotate cell types", "label clusters", "run CellTypist", "SingleR annotation", "marker gene dotplot", "transfer labels from reference atlas", "cell identity", "automated annotation", "reference mapping",… - [Aws Lambda Durable Functions](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-lambda-durable-functions) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-aws-lambda-durable-functions` > - [Quality Measures](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-quality-measures) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-quality-measures` > - [Clinical Data Standards](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-clinical-data-standards) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-clinical-data-standards` Reason about clinical data terminology standards — MedDRA hierarchy (LLT→PT→HLT→HLGT→SOC), ICD-10 code structure and grouping, SNOMED CT concept model, LOINC panel relationships, and mapping decisions between systems. Use when the user asks to code adverse events, map diagnoses to ICD-10, choose a coding granularity level, group AEs by SOC or PT, interpret SNOMED CT relationships, select LOINC co… - [Aws Lambda Microvms](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-lambda-microvms) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-aws-lambda-microvms` > - [Aws Serverless Deployment](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-aws-serverless-deployment) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-aws-serverless-deployment` AWS SAM and AWS CDK deployment for serverless applications. Triggers on phrases like: use SAM, SAM template, SAM init, SAM deploy, CDK serverless, CDK Lambda construct, NodejsFunction, PythonFunction, SAM and CDK together, serverless CI/CD pipeline. For general app deployment with service selection, use deploy-on-aws plugin instead. - [Hyperpod Issue Report](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-issue-report) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-issue-report` Generate comprehensive issue reports from HyperPod clusters (EKS and Slurm) by collecting diagnostic logs and configurations for troubleshooting and AWS Support cases. Use when users need to collect diagnostics from HyperPod cluster nodes, generate issue reports for AWS Support, investigate node failures or performance problems, document cluster state, or create diagnostic snapshots. Triggers on… - [Model Selection](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-model-selection) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-model-selection` Selects a base model for the user's use case by querying SageMaker Hub. Use when the user asks which model to use, wants to select or change their base model, mentions a model name or family (e.g., "Llama", "Mistral", "Nova"), or wants to evaluate a base model — always activate even for known model names because the exact Hub model ID must be resolved. Queries available models, presents benchmark… - [Risk Stratification Indices](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-risk-stratification-indices) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-risk-stratification-indices` > - [Trajectory Analysis](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-trajectory-analysis) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-trajectory-analysis` Single-cell trajectory inference pipeline covering diffusion pseudotime (DPT), PAGA, RNA velocity with scVelo, and fate mapping with CellRank. Use when the user mentions pseudotime, trajectory, lineage, differentiation, RNA velocity, scVelo, CellRank, PAGA, diffusion map, fate probabilities, terminal states, spliced/unspliced, velocyto, order cells by development, cell differentiation path, cell… - [Protein Structure Analysis](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-protein-structure-analysis) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-protein-structure-analysis` Pipeline skill for protein structure analysis covering PDB/mmCIF parsing, RMSD superposition, Ramachandran/dihedral analysis, binding pocket detection, contact maps, B-factor flexibility, DSSP secondary structure, and format conversion. Triggers on PDB, protein structure, RMSD, Ramachandran, binding pocket, Biopython, PyMOL, pocket detection, fpocket, DSSP, PDBQT, structural alignment, superposit… - [Hedis Measure Specification](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-hedis-measure-specification) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-hedis-measure-specification` > - [Cdisc Compliance](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-cdisc-compliance) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-cdisc-compliance` > - [Risk Adjustment Strategy](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-risk-adjustment-strategy) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-risk-adjustment-strategy` > - [Cheminformatics](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-cheminformatics) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-cheminformatics` Cheminformatics pipeline for small-molecule property calculation, filtering, and similarity analysis using RDKit. Use when the user asks to compute molecular descriptors, filter compounds by Lipinski or Veber rules, detect PAINS, calculate fingerprint similarity, run matched molecular pair analysis, generate ADMET descriptors, or process SMILES. Triggers include "RDKit", "molecular descriptors",… - [Dicom Processing](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-dicom-processing) — Skill · Free — `agentstack add skill-awslabs-hcls-agent-skills-dicom-processing` DICOM and NIfTI medical image processing pipeline. Triggers on DICOM, NIfTI, dcm2niix, de-identification, pydicom, DICOM header, conversion, anonymization, BIDS, DICOM tags, medical image format conversion, "DICOM to NIfTI", "burned-in PHI", "SeriesInstanceUID", "nibabel", "DICOM anonymization". - [Radiology Preprocessing](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-radiology-preprocessing) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-radiology-preprocessing` Structural MRI/CT preprocessing pipeline for radiology workflows covering skull stripping, bias field correction, registration, and intensity normalization. Triggers on skull stripping, bias correction, registration, ANTs, FSL, HD-BET, N4, brain extraction, normalization, FLIRT, FNIRT, SyN, fslreorient2std, MNI registration, T1 preprocessing. - [Rwd Cohort Analysis](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-rwd-cohort-analysis) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-rwd-cohort-analysis` Real-world data cohort analysis pipeline for claims and EHR data — cohort identification with ICD-10, NDC, and CPT codes, medication adherence metrics (PDC/MPR), propensity score estimation and balance diagnostics, Kaplan-Meier survival curves, and Cox proportional hazards models. Use when the user mentions claims data, cohort identification, ICD-10 codes, NDC codes, CPT codes, medication adheren… - [Multi Omics Integration](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-multi-omics-integration) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-multi-omics-integration` > - [Hyperpod Cluster Debugger](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-cluster-debugger) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-cluster-debugger` Diagnose and remediate cluster-wide HyperPod (EKS or Slurm) problems — creation / deployment failures (CloudFormation, EFA health check, lifecycle scripts, capacity), EKS access, node replacement, CloudFormation nested-stack errors, post-maintenance rollback state, dangling nodes, autoscaler conflicts. Includes `--validate` pre-flight. Read-only. - [Edc Data Validation](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-edc-data-validation) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-edc-data-validation` > - [Document Service](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-document-service) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-document-service` This skill should be used when the user asks to \"analyze this codebase\", \"document this service\", \"generate technical docs\", \"I inherited this code\", \"help me understand this system\", \"create docs for this project\", \"what does this system look like\", \"onboard me to this codebase\", \"this codebase has no docs\", \"visualize the architecture from code\", or any explicit request to p… - [Amazon Location Service](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-amazon-location-service) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-amazon-location-service` Integrates Amazon Location Service APIs for AWS applications. Use this skill when users want to add maps (interactive MapLibre or static images); geocode addresses to coordinates or reverse geocode coordinates to addresses; calculate routes, travel times, or service areas; find places and businesses through text search, nearby search, or autocomplete suggestions; retrieve detailed place informati… - [Api Gateway](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-api-gateway) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-api-gateway` > - [Directory Management](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-directory-management) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-directory-management` Manages project directory setup and artifact organization. Use when starting a new project, resuming an existing one, or when a PLAN.md needs to be associated with a project directory. Creates the project folder structure (specs/, scripts/, notebooks/, manifests/, agent_memory/) and resolves project naming. - [Imaging Study Design](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-imaging-study-design) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-imaging-study-design` Reasoning skill for medical imaging study design and biomarker selection. Use when the user asks to plan an imaging study, choose a preprocessing strategy, select an imaging biomarker, design a radiomics pipeline, handle DICOM de-identification, plan longitudinal imaging analysis, or pick a registration target. Triggers include "imaging study", "preprocessing strategy", "DICOM de-identification",… - [Scrna Seq Pipeline](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-scrna-seq-pipeline) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-scrna-seq-pipeline` Scanpy-based single-cell RNA-seq analysis pipeline covering loading (10X, h5ad), QC, normalization, HVG selection, PCA/UMAP, Leiden clustering, differential expression, and batch correction (Harmony, scVI). Use when the user mentions single-cell, scRNA-seq, Scanpy, AnnData, UMAP, clustering, 10X, h5ad, leiden, highly variable genes, Harmony, scVI, cluster cells, find marker genes, filter low-qual… - [Biomarker Discovery](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-biomarker-discovery) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-biomarker-discovery` Reason about biomarker discovery and validation in HCLS — classifying biomarker intent, choosing feature-selection and cross-validation strategies, avoiding leakage, and planning external replication. Use when the user asks to discover, develop, or validate a biomarker; select features from high-dimensional omics or clinical data; design a validation study; choose evaluation metrics; justify samp… - [Iam Policy Autopilot](https://agentstack.voostack.com/l/mcp-awslabs-iam-policy-autopilot) — MCP server · Free — `agentstack add mcp-awslabs-iam-policy-autopilot` IAM Policy Autopilot is an open source static code analysis tool that helps you quickly create baseline AWS IAM policies that you can refine as your application evolves. This tool is available as a command-line utility and MCP server for use within AI coding assistants for quickly building IAM policies. - [Sdk Getting Started](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-sdk-getting-started) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-sdk-getting-started` Validates the user's environment for SageMaker AI operations — checks SDK version, AWS region, and execution role. Use when the user says "set up", "getting started", "check my environment", "configure SDK", or as the first step in any plan involving SageMaker/Bedrock training, evaluation, or deployment. - [Dataset Transformation](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-dataset-transformation) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-dataset-transformation` Generates code that transforms datasets between ML schemas for model training or evaluation. Use when the user says "transform", "convert", "reformat", "change the format", or when a dataset's schema needs to change to match the target format — always use this skill for format changes rather than writing inline transformation code. Supports OpenAI chat, SageMaker SFT/DPO/RLVR/RLAIF, HuggingFace p… - [Structure Based Drug Design](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-structure-based-drug-design) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-structure-based-drug-design` Reasoning skill for structure-based drug design strategy. Use when the user asks to assess target druggability, choose a docking strategy, select a scoring function, define a binding site, interpret docking results, plan molecular dynamics or free energy perturbation (FEP), design a virtual screening cascade, or decide between fragment-based and HTS screening. Triggers include "drug design", "dru… - [Genomic Variant Interpretation](https://agentstack.voostack.com/l/skill-awslabs-hcls-agent-skills-genomic-variant-interpretation) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-hcls-agent-skills-genomic-variant-interpretation` Reason about germline and somatic variant classification using ACMG/AMP 2015 and AMP/ASCO/CAP frameworks. Use when the user asks to classify a variant, interpret a VCF annotation, resolve a VUS, apply ACMG criteria, weigh ClinVar evidence, evaluate gnomAD allele frequencies, interpret REVEL/CADD/SpliceAI scores, decide whether PVS1 applies, or assess gene-disease validity before reporting. Trigge… - [Hyperpod Nccl](https://agentstack.voostack.com/l/skill-awslabs-agent-plugins-hyperpod-nccl) — Skill · Free · security-reviewed — `agentstack add skill-awslabs-agent-plugins-hyperpod-nccl` Diagnose NCCL failures and adjacent training-pod failures on HyperPod GPU clusters (EKS or Slurm) — training hangs, AllReduce / collective-op timeouts, EFA or libfabric errors, rendezvous failures, EFA TCP fallback, /dev/shm or memlock issues, NCCL version mismatch across pods, container OOM / exit-137 / OOMKilled, GPU OOM (CUDA out of memory), CrashLoopBackOff / Pending pods, MASTER_ADDR DNS, Ne… --- Seller on AgentStack — the marketplace for AI agent skills and MCP servers. Every listing is security-reviewed. Install any with `agentstack add `.