# Tyche-MKR > Open-source publisher. Listings imported from github.com/Tyche-MKR — credited to the original author with their license. - **Listings:** 26 - **Total installs:** 0 - **Profile:** https://agentstack.voostack.com/s/tyche-mkr - **Website:** https://github.com/Tyche-MKR ## Published listings - [Citation Management](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-citation-management) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-citation-management` Comprehensive citation management for academic research. Search OpenAlex, PubMed, and Google Scholar for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing. - [Analytical Method Validation](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-analytical-method-validation) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-analytical-method-validation` Plan, execute, and document validation, verification, and transfer of analytical procedures under the governing framework - ICH Q2(R2) and Q14, USP <1220>/<1225>/<1226>, ICH M10 bioanalytical, CLSI EP, or ISO/IEC 17025. Use for HPLC, LC-MS/MS, GC, CE, ICP-MS, dissolution, qNMR, qPCR, NIR, and ligand binding or cell-based assays whenever the question is whether a procedure is fit for its intended… - [Clinical Reports](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-clinical-reports) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-clinical-reports` Create safety-bounded draft structures and run local deterministic checks for clinical case, diagnostic, trial, safety, and aggregate research reports. Use only with synthetic, de-identified, or aggregate inputs and verified source-fact manifests; every output requires qualified review. - [Bioservices](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-bioservices) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-bioservices` Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API. Best for cross-database analysis, ID mapping across services. For quick single-database lookups use gget; for sequence/file manipulation use biopython. - [Exploratory Data Analysis](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-exploratory-data-analysis) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-exploratory-data-analysis` Perform bounded, local exploratory analysis of explicitly supported scientific files. Use for redacted CSV/TSV/JSON profiles; optional NumPy, HDF5, FASTA/FASTQ, and basic image metadata inspection; missingness/leakage audits; outlier and transformation sensitivity; and rigorous EDA report scaffolds. Other domain formats are reference-only and unknown formats fail closed. - [Cellxgene Census](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-cellxgene-census) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-cellxgene-census` Query the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data. Use when you need population-scale cell metadata, gene expression slices, Census summary counts, source H5AD URIs/downloads, embeddings, spatial Census data, or reference atlas comparisons across organisms, tissues, diseases, assays, and cell types. For analyzing your own local single… - [Docx](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-docx) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-docx` Use this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx files) or Word templates (.dotx files). Triggers include: any mention of 'Word doc', 'word document', '.docx', '.dotx', or requests to produce professional documents with formatting like tables of contents, headings, page numbers, or letterheads. Also use when extracting or reorganizing content from… - [Gtars](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-gtars) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-gtars` Use Gtars for local genomic interval models and set algebra, overlaps and counts, consensus and coverage, tokenization, fragment processing, and refget/BEDbase planning across Python, Rust, and the CLI. - [Geniml](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-geniml) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-geniml` Use Geniml for audited local genomic-interval workflows: validate BED and universe contracts, plan Region2Vec or scEmbed runs, inspect model/tokenizer compatibility, and assess consensus universes. - [Geopandas](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-geopandas) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-geopandas` Guidance and local audit tools for Python workflows that directly use GeoPandas GeoSeries, GeoDataFrame, spatial operations, or vector-data I/O. - [Glycoengineering](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-glycoengineering) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-glycoengineering` Analyze and engineer protein glycosylation. Scan sequences for N-glycosylation sequons (N-X-S/T), predict O-glycosylation hotspots, and access curated glycoengineering tools (NetOGlyc, GlycoShield, GlycoWorkbench). For glycoprotein engineering, therapeutic antibody optimization, and vaccine design. - [Fluidsim](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-fluidsim) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-fluidsim` Plan, configure, inspect, restart, and analyze bounded FluidSim computational-fluid-dynamics simulations with explicit numerical-validity and HPC safety checks. Use for FluidSim solver selection, parameter review, FFT/MPI setup, output diagnostics, or restart compatibility. - [Clinical Decision Support](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-clinical-decision-support) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-clinical-decision-support` Prepare and validate research-only clinical decision-support evaluation, evidence-profile, cohort, survival, biomarker/model, privacy, and governance artifacts. Use for aggregate or synthetic research documentation and traceability—not patient care or live clinical operation. - [Flowio](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-flowio) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-flowio` Read, inspect, and write Flow Cytometry Standard (FCS) 2.0, 3.0, and 3.1 files with FlowIO. Use for low-level FCS metadata and channel inspection, NumPy event extraction, multi-dataset files, table export, and FCS 3.1 creation; use FlowKit for compensation, cytometry transforms, gating, or FlowJo workspaces. - [Benchling Integration](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-benchling-integration) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-benchling-integration` Benchling Python SDK and REST API integration for registry entities, inventory, ELN entries, workflows, Benchling Apps, and Data Warehouse queries. Use when automating lab data with benchling-sdk or the v2 API. - [Deepchem](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-deepchem) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-deepchem` Molecular ML with diverse featurizers and pre-built datasets. Use for property prediction (ADMET, toxicity) with traditional ML or GNNs when you want extensive featurization options and MoleculeNet benchmarks. Best for quick experiments with pre-trained models, diverse molecular representations. For graph-first PyTorch workflows use torchdrug; for benchmark datasets use pytdc. - [Genomic Intelligence](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-genomic-intelligence) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-genomic-intelligence` Predict regulatory features, gene structure, and expression directly from DNA sequence using Genomic Intelligence's hosted transformer DNA language models — no local GPU or model weights. Six tasks over a REST API and a hosted MCP server (keyless public demo): promoter regions, splice donor/acceptor sites, enhancer activity, chromatin state, sequence-to-expression (log TPM), and de-novo gene anno… - [Autoskill](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-autoskill) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-autoskill` Observe the user's screen via screenpipe, detect repeated research workflows, match them against existing scientific-agent-skills, and draft new skills (or composition recipes that chain existing ones) for the patterns not yet covered. Use when the user asks to analyze their recent work and propose skills based on what they actually do. Requires the screenpipe daemon (https://github.com/screenpip… - [Get Available Resources](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-get-available-resources) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-get-available-resources` Detect host inventory and effective CPU, memory, disk, scheduler, container, and accelerator limits when a user asks for resource-aware planning or before a clearly resource-sensitive local workload. Produces a redacted JSON snapshot and conservative planning helpers without stress tests or assuming visible host hardware is usable. - [Database Lookup](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-database-lookup) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-database-lookup` Query documented public database APIs with explicit endpoints, filters, pagination, and provenance. Use when a scientific, regulatory, financial, or other database-backed fact must be retrieved reproducibly from a named source rather than inferred from general knowledge. - [Datamol](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-datamol) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-datamol` Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery including SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel processing. Returns native rdkit.Chem.Mol objects. For advanced control or custom parameters, use rdkit directly. - [Dnanexus Integration](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-dnanexus-integration) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-dnanexus-integration` Build and operate reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Use for DNAnexus data transfers, dxapp.json development, execution monitoring, workflow import, and project automation. - [Bids](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-bids) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-bids` > - [Gget](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-gget) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-gget` Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST/BLAT, viral sequence downloads, AlphaFold structures, enrichment analysis, OpenTargets, COSMIC, CELLxGENE, and 8cube mouse specificity/expression data. Best for interactive exploration and simple queries. For batch processing or advanced BLAST use biopython; for multi-database Python workflows use bio… - [Exa Search](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-exa-search) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-exa-search` Web toolkit powered by Exa, tuned for scientific and technical content. Use this skill when the user needs to search the web or fetch/extract URL content. Covers: web search (semantic lookups, research, current info — with optional research-paper category and academic domain filtering) and URL extraction (fetching pages, articles, academic PDFs in batch). Use this skill for web-related tasks when… - [Dhdna Profiler](https://agentstack.voostack.com/l/skill-tyche-mkr-scientific-agent-skills-dhdna-profiler) — Skill · Free · security-reviewed — `agentstack add skill-tyche-mkr-scientific-agent-skills-dhdna-profiler` Extract cognitive patterns and thinking fingerprints from any text. Use this skill when the user wants to analyze how someone thinks, understand cognitive style, profile writing or speech patterns, compare thinking styles between people, asks "what's my thinking style", "analyze how this person reasons", "cognitive profile", "thinking pattern", "DHDNA", "digital DNA", or wants to understand the m… --- Seller on AgentStack — the marketplace for AI agent skills and MCP servers. Every listing is security-reviewed. Install any with `agentstack add `.