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MCP verified MIT Self-run

Librarian Mcp

mcp-ngmeyer-librarian-mcp · by ngmeyer

The Karpathy LLM Wiki pattern, productionized. MCP server that gives Claude a librarian for your Obsidian vault — graph traversal, auto-wikilinks, trigram search.

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Install

$ agentstack add mcp-ngmeyer-librarian-mcp

✓ scanned · ✓ verified, works with Claude Code, Cursor, and more.

Security review

✓ Passed

No issues found. Passed automated security review. · v0.1.0 How review works →

  • ✓ Prompt-injection patterns
  • ✓ Secret / credential exfiltration
  • ✓ Dangerous shell & filesystem operations
  • ✓ Untrusted network calls
  • ✓ Known-malicious package signatures

What it can access

  • ✓ Network access No
  • ✓ Filesystem access No
  • ✓ Shell / process execution No
  • ✓ Environment & secrets No
  • ✓ Dynamic code execution No

From automated source analysis of v0.1.0. “Used” means the capability is present in the source — more access means more to trust, not that it’s unsafe.

View the full security report →

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Reliability & compatibility

✓ Security review passed
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Declared compatibility

Claude CodeClaude DesktopCursorWindsurf

Compatibility is declared by the source manifest. End-to-end runtime verification is coming, see below.

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About

Librarian

[](LICENSE) [](https://claude.ai/code) [](https://modelcontextprotocol.io) [](https://github.com/ngmeyer/homebrew-tap) []()

Give Claude a librarian for your markdown vault.

Librarian is the Karpathy LLM Wiki pattern, productionized as an MCP server — bidirectional graph traversal, auto-wikilinks, trigram search, community detection, and a D3 graph view, all from inside Claude. Works against any Obsidian vault or plain folder of markdown files.

> Runs entirely locally. Your vault data never leaves your machine. Librarian reads and writes files on disk and communicates with Claude over stdio. No network calls, no telemetry, no cloud storage.

Quick Start

# 1. Install
brew install ngmeyer/tap/librarian-mcp

# 2. Point at your vault and auto-configure Claude
librarian-mcp --setup ~/my-vault

# 3. Restart Claude, then try:
#    /librarian analyze     — see your vault's knowledge graph
#    /librarian search      — find anything across all notes
#    /librarian status      — vault health overview

--setup writes the MCP server config into Claude Desktop and Claude Code (with backups), and installs the /librarian skill so you get 12 slash commands out of the box.

Install

Homebrew (macOS)

brew install ngmeyer/tap/librarian-mcp

Pre-built binaries

Download from GitHub Releases for macOS (arm64/x8664), Linux (arm64/x86_64), and Windows. Place the binary on your PATH.

Build from source (requires Rust)

cargo install --git https://github.com/ngmeyer/librarian-mcp

How It Works

Librarian is a standalone binary — it works directly on your markdown files. Obsidian does not need to be running (and they can run simultaneously without conflict). Claude connects via the Model Context Protocol over stdio.

How is this different from...

| | Read files directly | Obsidian Copilot | mcp-obsidian | Librarian | |---|---|---|---|---| | Trigram-indexed search | No | Plugin | Plugin | Yes | | Auto-wikilinks on write | No | No | No | Yes | | Knowledge graph traversal | No | No | Partial | Yes (BFS, shortest path) | | Community detection | No | No | No | Yes (Louvain) | | Interactive graph viz | No | No | No | Yes (D3.js) | | Works without Obsidian | Yes | No | No | Yes | | Works in Claude Code | Yes (manual) | No | No | Yes | | Standalone binary | N/A | No | No | Yes |

Setup

librarian-mcp --setup ~/my-vault

This auto-configures Claude Desktop and Claude Code (with backups of existing configs). Restart Claude to connect.

Multiple vaults

librarian-mcp --setup ~/vaults/notes ~/vaults/research

Manual configuration

Add to your Claude Desktop config (~/Library/Application Support/Claude/claude_desktop_config.json) or Claude Code config (~/.claude/settings.json):

{
  "mcpServers": {
    "librarian": {
      "command": "librarian-mcp",
      "args": ["/path/to/your/vault"]
    }
  }
}

Environment variables

LIBRARIAN_VAULT=/path/to/vault        # Single vault
LIBRARIAN_VAULTS=/vault/one:/vault/two # Multiple vaults (colon-separated, Unix only)

Tools

Librarian exposes 17 tools to Claude:

| Tool | Description | |------|-------------| | library_search | Full-text search across all vault files (trigram-indexed) | | library_read | Read a file by relative path | | library_write | Write a file with auto-wikilink detection | | library_list | List files and directories (shows vault roots when multi-vault) | | library_links | Get backlinks and outgoing wikilinks for a file | | library_tags | List all #tags with counts, optionally filtered by prefix | | library_metadata | Read YAML frontmatter from a file | | library_daily | Create or append to a daily note (Journal/YYYY/YYYY-MM-DD.md) | | library_stats | Vault statistics: file count, word count, link density, orphan notes | | library_suggest_links | Find unlinked mentions of existing notes (including aliases) | | library_traverse | BFS traversal from a note — explore the topic neighborhood N hops deep | | library_shortest_path | Find the shortest link chain between two notes | | library_graph_analysis | Connected components, hub notes, bridges, orphans | | library_import | Convert PDF, DOCX, images, etc. to markdown (requires MarkItDown) | | library_cluster | Detect topic communities using Louvain modularity optimization | | library_visualize | Generate interactive HTML graph visualization (D3.js) | | library_report | Comprehensive vault analysis: god nodes, communities, bridges |

The /librarian Skill

--setup installs a Claude Code skill that gives you 12 high-level commands built on the tools above:

| Command | What it does | |---------|-------------| | /librarian search | Deep search with synthesis across top results | | /librarian analyze | Full vault analysis — communities, hubs, visualization | | /librarian graph [note] | Explore a note's neighborhood or vault-wide structure | | /librarian connect [path] | Find and apply missing wikilinks | | /librarian daily [text] | Append to today's daily note | | /librarian status | Quick vault health check | | /librarian ingest [path] | Import a local markdown file into the vault | | /librarian import | Convert PDF/DOCX/images to vault markdown | | /librarian from web | Import a web page as a vault note | | /librarian from twitter | Import an X/Twitter thread | | /librarian from gmail | Import Gmail threads | | /librarian from calendar | Import calendar events |

Example: Research Skill Graph

The repo includes a 16-file example vault demonstrating multi-lens research analysis — 6 analytical lenses that force different perspectives on any topic.

To try it after cloning:

git clone https://github.com/ngmeyer/librarian-mcp
cd librarian-mcp
librarian-mcp --setup examples/research-skill-graph

Then in Claude Code: "Follow the execution instructions in index.md. Research: Why are prediction market edges compressing?"

The vault includes source evaluation (5-tier trust system), contradiction protocol, synthesis rules, and a knowledge layer that compounds across projects. See [examples/research-skill-graph/index.md](examples/research-skill-graph/index.md) for the full system.

Features

Auto-linking

When Claude writes files via library_write, Librarian scans for mentions of existing note titles and wraps them in [[wikilinks]]. This happens only on explicit writes — Librarian never modifies files you didn't ask it to write.

Links use canonical file names so they resolve correctly in Obsidian's graph view, even on case-sensitive filesystems. Frontmatter aliases are supported: if a note has aliases: [ML, machine learning], mentions will auto-link using [[Note Name|ML]] format.

Auto-linking skips code blocks, inline code, URLs, and existing wikilinks to avoid corrupting content.

Knowledge graph traversal

Librarian builds a bidirectional graph from your vault's [[wikilinks]] and exposes three graph tools:

  • Traverse — BFS from any note, N hops deep. "Show me everything connected to this topic."
  • Shortest path — Find the link chain between two notes. "How are these ideas connected?"
  • Graph analysis — Connected components, hub notes, bridge notes, orphans. "What's the structure of my vault?"

Community detection

Louvain modularity optimization identifies topic clusters in your vault. Combined with betweenness centrality and PageRank, the report tool ranks "god nodes" (structurally important notes) and finds surprising cross-community connections.

Search

Search is backed by an in-memory trigram index built on startup. Handles vaults with 10,000+ files.

Exclusion patterns

By default, Librarian skips .obsidian/, .trash/, .git/, and node_modules/. Drop a .librarianignore file (gitignore syntax) in your vault root to customize:

# .librarianignore
templates/
private/

Obsidian compatibility

Librarian works seamlessly alongside Obsidian — both can be open at the same time:

  • Reads and writes standard [[wikilinks]] and [[note|display text]]
  • Respects YAML frontmatter and aliases
  • Skips .obsidian/ and .trash/ directories
  • Auto-linked wikilinks resolve in Obsidian's graph view
  • Daily notes follow Journal/YYYY/YYYY-MM-DD.md convention

License

MIT

Source & license

This open-source MCP server is cataloged on AgentStack and links to its original source — we do not rehost the code.

Install and usage instructions live in the source repository linked above.

Reviews

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Versions

  • v0.1.0 Imported from the upstream source.