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SKILL verified Apache-2.0 Self-run

Template Manuscript Creation

skill-docxology-template-manuscript-creation · by docxology

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Install

$ agentstack add skill-docxology-template-manuscript-creation

✓ scanned · ✓ verified, works with Claude Code, Cursor, and more.

Security review

✓ Passed

No issues found. Passed automated security review. · v0.1.0 How review works →

  • ✓ Prompt-injection patterns
  • ✓ Secret / credential exfiltration
  • ✓ Dangerous shell & filesystem operations
  • ✓ Untrusted network calls
  • ✓ Known-malicious package signatures

What it can access

  • ✓ Network access No
  • ✓ Filesystem access No
  • ✓ Shell / process execution No
  • ✓ Environment & secrets No
  • ✓ Dynamic code execution No

From automated source analysis of v0.1.0. “Used” means the capability is present in the source — more access means more to trust, not that it’s unsafe.

View the full security report →

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Reliability & compatibility

✓ Security review passed
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Declared compatibility

Claude CodeClaude Desktop

Compatibility is declared by the source manifest. End-to-end runtime verification is coming, see below.

Preview Execution monitoring

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About

Manuscript creation

Natural invoke

  • "Create a new optimization research project and manuscript from this brief"
  • "Scaffold projects/mytopic/ like templatecode_project"
  • "I have a research idea — set up manuscript + src + tests"

Inputs to confirm

  • Research topic — objectives, methods, expected contributions (user provides).
  • Exemplar — default [projects/templates/template_code_project/](../../../projects/templates/templatecodeproject/); Active Inference multi-track → template_active_inference; prose → template_prose_project; AutoResearch/readiness loop → template_autoresearch_project; meta-template / infrastructure introspection → template_template; search → local template_search_project from archive. Roster: [docs/_generated/active_projects.md](../../generated/activeprojects.md) and [projects/AGENTS.md](../../../projects/AGENTS.md#permanent-canonical-exemplars-and-optional-search-add-on).
  • Cross-ref style — Pandoc-crossref vs registry tokens (pick one; see [manuscript-cross-references](../manuscript-cross-references/SKILL.md)).

Workflow

  1. Copy exemplar shape — match section numbering (01_* vs 00_*), not generic skeleton if exemplar differs.
  1. Manuscript files — config.yaml, preamble.md, references.bib, ordered *.md sections, glossary/references as exemplar does.
  1. Cross-refs — Pandoc: @fig:, @eq:, @sec:, [@key] per [docs/guides/manuscript-semantics.md](../../guides/manuscript-semantics.md). Registry: refs/labels.yaml + [[FIG:]] tokens.
  1. src/ — typed public APIs, get_logger, fixed seeds, custom exceptions where needed.
  1. scripts/ — thin orchestrators only; MPLBACKEND=Agg; print output paths.
  1. tests/ — no mocks; ≥90% on projects//src.
  1. Docs — project AGENTS.md + README.md; link active_projects doc, do not hard-code roster.
  1. One-shot alternative — for LLM scaffold of entire tree, see [docs/guides/new-project-one-shot-prompt.md](../../guides/new-project-one-shot-prompt.md).

Deliverables

  • Full projects// tree or delta from brief
  • How to run: uv run pytest projects//tests/ --cov=... and uv run python scripts/01_run_tests.py --project

Verification commands

uv sync
uv run python scripts/01_run_tests.py --project 
uv run python -m infrastructure.validation.cli markdown projects//manuscript/

When NOT to use

  • Existing manuscript claim audit → [manuscript-claim-verification](../manuscript-claim-verification/SKILL.md)
  • Cross-ref-only fixes → [manuscript-cross-references](../manuscript-cross-references/SKILL.md)

References

Section checklist and legacy examples: [references/structure-checklist.md](references/structure-checklist.md)

Source & license

This open-source skill is cataloged on AgentStack and links to its original source — we do not rehost the code.

Install and usage instructions live in the source repository linked above.

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Versions

  • v0.1.0 Imported from the upstream source.

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