Worktree Merge

Worktree Merge

Merge a worktree's branch into a target branch. This is always a real git merge — the target is a local branch where the worktree's commits get folded in.

User input: $ARGUMENTS

Step 1 — Determine the source branch

If currently inside a worktree (not the main working tree):

• Use the current worktree's branch.

If $ARGUMENTS specifies a branch name or worktree path:

• Use that. Verify it has an associated worktree via git worktree list --porcelain.

If neither:

• List all worktrees with git worktree list and ask the user which one to merge.

Record the worktree path and branch name for subsequent steps.

Step 2 — Determine the target branch

The target is where the source branch's commits will be merged into.

If --into is in the arguments: use that branch.

If no target is specified: ask the user which branch to merge into. Common choices:

• main — the default branch
• A parent feature branch (e.g., feat/auth when merging feat/auth-nav)

The target branch must be checked out somewhere — either in the main working tree or in another worktree. Find it:

git worktree list --porcelain

If the target branch isn't checked out anywhere, check it out in the main working tree first.

Step 3 — Pre-flight checks

Clean working tree

git -C "" status --porcelain

If there are uncommitted changes, stop and tell the user:

> This worktree has uncommitted changes. Please commit them first (e.g., run /commit), then re-run /empire-git:worktree-merge.

Commits to merge

git -C "" log --oneline ..

If there are no commits ahead of the target, stop:

> Branch ` has no new commits relative to `. Nothing to merge.

Step 4 — Perform the merge

Default merge mode: --no-ff (preserves branch history as a merge commit, easier to read and revert).

If --ff was in $ARGUMENTS, omit --no-ff and let git fast-forward when possible. Use this for rebase-only or linear-history teams.

# Default
git -C "" merge "" --no-ff

# With --ff
git -C "" merge ""

If your team forbids merge commits entirely, this skill is the wrong tool — use git rebase directly in the source worktree, then worktree-close --push.

If merge conflicts occur:

1. List the conflicting files:

``bash git -C "" diff --name-only --diff-filter=U ``

1. Report the conflicts clearly to the user.
2. Stop. Merge conflicts need human judgment — auto-resolving risks silently introducing bugs. Tell the user to resolve conflicts in the target worktree, then run /empire-git:worktree-close on the source worktree when ready.

On success, print:

Merged '' into ''.

Step 5 — Cleanup (unless --no-close)

If --no-close was in the arguments, skip this step and just print the result. The user may want to keep the source worktree around for further work.

Otherwise, present the same cleanup options as /empire-git:worktree-close:

1. Remove worktree only — keeps the branch around in case it's needed
2. Remove worktree + delete branch — full cleanup, since the commits now live in the target branch
3. Keep everything — do nothing

After a successful merge, default to option 2 — the branch's commits are now in the target, so the source branch has served its purpose.

Run the chosen option as a single Bash call. The session may be sitting inside the source worktree, so each block resolves the main working tree once and anchors every git command with git -C "$MAIN_REPO" — nothing depends on the shell's cwd, which vanishes the instant the worktree is removed. One invocation also keeps MAIN_REPO in scope: shell variables do not survive across separate Bash calls, so the assignment must live in the same call as its uses. awk reads the path with substr($0, 10) rather than $2 so worktree paths containing spaces are not truncated.

Option 1: remove worktree only

MAIN_REPO=$(git worktree list --porcelain | awk '/^worktree / { print substr($0, 10); exit }')
git -C "$MAIN_REPO" worktree remove ""
git -C "$MAIN_REPO" worktree prune
bash "${CLAUDE_PLUGIN_ROOT}/scripts/worktree-registry.sh" remove ""

Option 2: remove worktree + delete branch

git branch -d refuses to delete a branch still checked out in a worktree, so the worktree is removed first. -d is a safe delete: if it fails, the branch has commits beyond what was merged — surface that rather than force-deleting. The later lines still run, so the worktree is pruned and deregistered even when the branch is kept.

MAIN_REPO=$(git worktree list --porcelain | awk '/^worktree / { print substr($0, 10); exit }')
git -C "$MAIN_REPO" worktree remove ""
git -C "$MAIN_REPO" branch -d ""
git -C "$MAIN_REPO" worktree prune
bash "${CLAUDE_PLUGIN_ROOT}/scripts/worktree-registry.sh" remove ""

If the registry call fails, print a warning and continue — the worktree removal already succeeded.

Print a summary of what was done.

When to use this

Batching small fixes: Several small worktree branches (typo, dep bump, color tweak) merged locally into one branch before opening a single PR:

/empire-git:worktree-merge fix/typo --into feat/cleanup
/empire-git:worktree-merge fix/deps --into feat/cleanup
/empire-git:worktree-merge fix/color --into feat/cleanup
# Then open one PR from feat/cleanup

Branch decomposition: Sub-branches merged back into a parent feature branch:

/empire-git:worktree-merge feat/auth-nav --into feat/auth
/empire-git:worktree-merge feat/auth-table --into feat/auth
# Then open one PR from feat/auth

Guiding principles

This skill does one thing: git merge. For pushing to remote, use /empire-git:worktree-close --push. For opening PRs, use the user's own PR workflow. Keeping these concerns separate avoids conflicts with existing conventions.

Merge conflicts need human judgment. When conflicts occur, clearly list the affected files and let the user decide. Attempting to auto-resolve risks silently introducing bugs.

Use git branch -d (safe delete), not -D. If the safe delete fails after a merge, something unexpected happened — surface it rather than force through.

Source & license

This open-source skill is cataloged on AgentStack and links to its original source — we do not rehost the code.

• Author: marcoskichel
• Source: marcoskichel/empire
• License: MIT

Install and usage instructions live in the source repository linked above.