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SKILL verified MIT Self-run

Bio Analysis Tools

skill-onescience-ai-oneskills-analysis-tools · by onescience-ai

生物信息分析工具箱范畴路由。用于 Biopython/pysam/Scanpy/scvi-tools/R/Bioconductor/RDKit/质谱工具/统计可视化等工具型请求，选择具体工具 skill，明确输入格式、API 边界和下游交接。

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Install

$ agentstack add skill-onescience-ai-oneskills-analysis-tools

✓ scanned · ✓ verified, works with Claude Code, Cursor, and more.

Security review

✓ Passed

No issues found. Passed automated security review. · v0.1.0 How review works →

  • ✓ Prompt-injection patterns
  • ✓ Secret / credential exfiltration
  • ✓ Dangerous shell & filesystem operations
  • ✓ Untrusted network calls
  • ✓ Known-malicious package signatures

What it can access

  • ✓ Network access No
  • ✓ Filesystem access No
  • ✓ Shell / process execution No
  • ✓ Environment & secrets No
  • ✓ Dynamic code execution No

From automated source analysis of v0.1.0. “Used” means the capability is present in the source — more access means more to trust, not that it’s unsafe.

View the full security report →

Verified badge

Passed review? Show it. Paste this badge into your README, it links to the public security report.

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[![AgentStack Verified](https://agentstack.voostack.com/badges/verified.svg)](https://agentstack.voostack.com/security/report/skill-onescience-ai-oneskills-analysis-tools)

Reliability & compatibility

✓ Security review passed
0 installs to date
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● 2mo ago

Declared compatibility

Claude CodeClaude Desktop

Compatibility is declared by the source manifest. End-to-end runtime verification is coming, see below.

Preview Execution monitoring

We're building live execution health for every listing: tool-call success rate, median latency, uptime, and last-checked timestamps, measured, not self-reported. It isn't live yet, so we don't show numbers we can't stand behind.

How agent discovery & health will work →
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About

生信分析工具箱范畴路由

当用户主要在问“用什么工具、怎么解析、怎么写某个库的分析逻辑”时，使用本范畴。若任务是端到端分析链，先回到 ../workflows/SKILL.md。

具体 skill 路由

  • Python 生信基础库、序列/结构/NCBI、BAM/VCF 编程：读取 ./python-bio-toolkit/SKILL.md
  • R/Bioconductor、DESeq2、edgeR、Seurat、GenomicRanges：读取 ./r-bioconductor-toolkit/SKILL.md
  • Scanpy、AnnData、scvi-tools、cell type annotation：读取 ./single-cell-toolkit/SKILL.md
  • RDKit、SMILES/SDF、fingerprint、descriptor、similarity：读取 ./cheminformatics-toolkit/SKILL.md
  • PyOpenMS、matchms、mzML、feature detection、spectral matching：读取 ./mass-spectrometry-toolkit/SKILL.md
  • 统计建模、可视化、报告图：读取 ./statistics-visualization/SKILL.md

交接规则

输出时至少整理：

  • tool_family
  • input_format
  • operation
  • data_size
  • expected_output
  • version_or_api_risk
  • execution_entry

Source & license

This open-source skill is cataloged on AgentStack and links to its original source — we do not rehost the code.

Install and usage instructions live in the source repository linked above.

Reviews

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Versions

  • v0.1.0 Imported from the upstream source.

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